Nowak M, P Schuster (1989). Error thresholds of replication in finite populations. Mutation frequencies and the onset of Muller's ratchet. J theor Biol137: 375-395. (PDF)
Nowak M, K Sigmund (1989). Game-dynamical aspects of the prisoner's dilemma. Appl Math Comp30: 191-213. (PDF)
Nowak M, K Sigmund (1989). Oscillations in the evolution of reciprocity. J theor Biol137: 21-26. (PDF)
Nowak M (1990). An evolutionarily stable strategy may be inaccessible. J theor Biol142: 237-241. (PDF)
Nowak M (1990). HIV mutation rate. Nature347: 522. (PDF)
Nowak M (1990). Stochastic strategies in the prisoner's dilemma. Theor Popul Biol38: 93-112. (PDF)
Nowak MA, RM May, RM Anderson (1990). The evolutionary dynamics of HIV quasispecies and the development of immunodeficiency disease. AIDS4: 1095-1103. (PDF)
Nowak M, K Sigmund (1990). The evolution of stochastic strategies in the prisoner's dilemma. Acta Appl Math20: 247-265. (PDF)
Kwiatkowski D, M Nowak (1991). Periodic and chaotic host-parasite interactions in human malaria. P Natl Acad Sci USA88: 5111-5113. (PDF)
Magurran AE, MA Nowak (1991). Another battle of the sexes: The consequences of sexual asymmetry in mating costs and predation risk in the guppy, Poecilia reticulata. Proc R Soc B246: 31-38. (PDF)
Nowak M (1991). The evolution of viruses. Competition between horizontal and vertical transmission of mobile genes. J theor Biol150: 339-347. (PDF)
Nowak MA, RM Anderson, A R McLean, T Wolfs, J Goudsmit, RM May (1991). Antigenic diversity thresholds and the development of AIDS. Science254: 963-369. (PDF)
Nowak MA, RM May (1991). Mathematical biology of HIV infections: antigenic variation and diversity threshold. Math Biosci106: 1-21. (PDF)
Nowak MA, AR McLean (1991). A mathematical model of vaccination against HIV to prevent development of AIDS. Proc R Soc B246: 141-146. (PDF)
McLean AR, MA Nowak (1992). Competition between zidovudine sensitive and resistant strains of HIV. AIDS6: 71-79. (PDF)
McLean AR, MA Nowak (1992). Models of interactions between HIV and other pathogens. J theor Biol155: 69-86. (PDF)
Nowak MA (1992). Variability in HIV infections. J theor Biol155: 1-20. (PDF)
Nowak MA (1992). What is a quasispecies? Trends Ecol Evol7: 118-121. (PDF)
Nowak MA, RM May (1992). Coexistence and competition in HIV infections. J theor Biol159: 329-342. (PDF)
Nowak MA, RM May (1992). Evolutionary games and spatial chaos. Nature359: 826-829. (PDF)
Nowak MA , K Sigmund (1992). Tit for tat in heterogeneous populations. Nature355: 250-253. (PDF)
Nowak MA, K Tarczy-Hornoch, JM Austyn (1992). The optimal number of major histocompatibility complex molecules in an individual. P Natl Acad Sci USA89: 10896-10899. (PDF)
Payne RJH, MA Nowak, BS Blumberg (1992). Analysis of a cellular model to account for the natural history of infection by the hepatitis B virus and its role in the development of primary hepatocellular carcinoma. J theor Biol159: 215-240. (PDF)
Sheratt JA, MA Nowak (1992). Oncogenes, anti-oncogenes and the immune response to cancer: A mathematical model. Proc R Soc B248: 261-271. (PDF)
Nowak MA, RM May (1993). AIDS pathogenesis: Mathematical models of HIV and SIV infections. AIDS7: S3-S18. (PDF)
Nowak MA, RM May (1993). The spatial dilemmas of evolution. Int J Bifurcat Chaos3: 35-78. (PDF)
Nowak MA, AR McLean (1993). Mathematical models for the pathogenesis of AIDS. In Mathematics Applied to Biology and Medicine, eds. J Demongeot, V Capasso. Winnepeg: Wuerz, 275-284.
Nowak MA, K Sigmund (1993). A strategy of win-stay, lose-shift that outperforms tit-for-tat in Prisoner's Dilemma. Nature364: 56-58. (PDF)
Nowak MA, K Sigmund (1993). Chaos and the evolution of cooperation. P Natl Acad Sci USA90: 5091-5094. (PDF)
Berry RM, MA Nowak (1994). Defective escape mutants of HIV. J theor Biol171: 387-395. (PDF)
Bonhoeffer S, MA Nowak (1994). Intra-host versus inter-host selection: Viral strategies of immune function impairment. P Natl Acad Sci USA91: 8062-8066. (PDF)
Bonhoeffer S, MA Nowak (1994). Mutation and the evolution of virulence. Proc R Soc B258: 133-140. (PDF)
May RM, MA Nowak (1994). Superinfection, metapopulation dynamics, and the evolution of diversity. J theor Biol170: 95-114. (PDF)
Moxon ER, PB Rainey, MA Nowak, RE Lenski (1994). Adaptive evolution of highly mutable loci in pathogenic bacteria. Curr Biol4: 24-33.(PDF)
Nowak MA (1994). The evolutionary dynamics of HIV infections. In First European Congress of Mathematics, Vol II, eds. A Joseph, F Mignot, F Murat, B Prum, R Rentschler. Basel: Birkhauser, 311-326.
Nowak MA, S Bonhoeffer, RM May (1994). More spatial games. Int J Bifurcat Chaos4: 33-56. (PDF)
Nowak MA, S Bonhoeffer, RM May (1994). Spatial games and the maintenance of cooperation. P Natl Acad Sci USA91: 4877-4881. (PDF)
Nowak MA, RM May (1994). Superinfection and the evolution of parasite virulence. Proc R Soc B255: 81-89. (PDF)
Nowak MA, K Sigmund (1994). The alternating prisoner's dilemma. J theor Biol168: 219-226. (PDF)
Payne RJH, MA Nowak, BS Blumberg (1994). A cellular model to explain the pathogenesis of infection by the hepatitis B virus. Math Biosci123: 25-58. (PDF)
Tilman D, RM May, CL Lehman, MA Nowak (1994). Habitat destruction and the extinction debt. Nature371: 65-66. (PDF)
Bonhoeffer S, EC Holmes, MA Nowak (1995). Causes of HIV diversity. Nature376: 125. (PDF)
Bonhoeffer S, EC Holmes, MA Nowak (1995). Varying selection pressure in HIV-1 infection. J Acq Immun Def Synd10: 85.
Bonhoeffer S, MA Nowak (1995). Can live attenuated virus work as post-exposure treatment? Immunol Today16: 131-135. (PDF)
Lipsitch M, EA Herre, MA Nowak (1995). Host population structure and the evolution of virulence: A "law of diminishing returns". Evolution49: 743-748. (PDF)
Lipsitch M, MA Nowak (1995). The evolution of virulence in sexually transmitted HIV/AIDS. J theor Biol174: 427-440. (PDF)
Lipsitch M, MA Nowak, D Ebert, RM May (1995). The population dynamics of vertically and horizontally transmitted parasites. Proc R Soc B260: 321-327.(PDF)
May RM, S Bonhoeffer, MA Nowak (1995). Spatial games and evolution of cooperation. In Advances in Artificial Life, eds. F Moran, A Moreno, J J Merelo, P Chacon. Berlin: Springer, 749-759.
May RM, MA Nowak (1995). Coinfection and the evolution of parasite virulence. Proc R Soc B261: 209-215. (PDF)
McMichael AJ, S Rowland-Jones, P Klenerman, et al (1995). Epitope variation and T-cell recognition. J Cell Biochem Suppl S21A: 60.
Nowak MA (1995). AIDS pathogenesis: From models to viral dynamics in patients. J Acq Immun Def Syn10: S1-S5. (PDF)
Nowak M (1995). Evolutionary dynamics of HIV infections. In Models for Infectious Human Diseases, eds. V Isham, G Medley. Cambridge University Press.
Nowak MA, S Bonhoeffer, C Loveday, P Balfe, M Semple, S Kaye, M Tenant-Flowers, R Tedder (1995). HIV results in the frame: Results confirmed. Nature375: 193. (PDF)
Nowak MA, RM May, RE Phillips, S Rowland-Jones, DG Lalloo, S McAdam, P Klenerman, B Köppe, K Sigmund, CRM Bangham, AJ McMichael (1995). Antigenic oscillations and shifting immunodominance in HIV-1 infections. Nature375: 606-611. (PDF)
Nowak MA, RM May, K Sigmund (1995). Immune responses against multiple epitopes. J theor Biol175: 325-353. (PDF)
Nowak MA, RM May, K Sigmund (1995). The arithmetics of mutual help. Sci Am272: 76-81. (PDF)
Nowak MA, AJ McMichael (1995). How HIV defeats the immune system. Sci Am273: 58-65. (PDF)
Nowak MA, K Sigmund (1995). Invasion dynamics of the finitely repeated prisoner's dilemma. Game Econ Behav11: 364-390. (PDF)
Nowak M, K Sigmund, E El-Sedy (1995). Automata, repeated games and noise. J Math Biol33: 703-722. (PDF)
Wei X, SK Ghosh, ME Taylor, VA Johnson, EA Emini, P Deutsch, JD Lifson, S Bonhoeffer, MA Nowak, BH Hahn, MS Saag, GM Shaw (1995). Viral dynamics in human immunodeficiency virus type 1 infection. Nature373: 117-122. (PDF)
Antia R, MA Nowak, RM Anderson (1996). Antigenic variation and the within-host dynamics of parasites. P Natl Acad Sci USA93: 985-989. (PDF)
Boerlijst MC, S Bonhoeffer, MA Nowak (1996). Viral quasi-species and recombination. Proc R Soc B263: 1577-1584. (PDF)
Bonhoeffer S, AVM Herz, MC Boerlijst, S Nee, MA Nowak, RM May (1996). Explaining "linguistic features" of noncoding DNA. Science271: 14-15. (PDF)
Bonhoeffer S, AVM Herz, MC Boerlijst, MA Nowak, RM May (1996). No signs of hidden language in noncoding DNA. Phys Rev Lett76: 1977. (PDF)
Herz AVM, S Bonhoeffer, RM Anderson, RM May, MA Nowak (1996). Viral dynamics in vivo: Limitations on estimates of intracellular delay and virus decay. P Natl Acad Sci USA93: 7247-7251. (PDF)
Klenerman P, RE Phillips, CR Rinaldo, LM Wahl, RM May, AJ McMichael, MA Nowak (1996). Cytotoxic T lymphocytes and viral turnover in HIV type 1 infection. P Natl Acad Sci USA93: 15323-15328.(PDF)
Lipsitch M, S Siller, MA Nowak (1996). The evolution of virulence in pathogens with vertical and horizontal transmission. Evolution50: 1729-1741. (PDF)
McMichael AJ, P Goulder, S Rowland-Jones, MA Nowak, R Philips (1996). HIV escapes from cytotoxic lymphocytes. Immunology89: 111.
Nowak MA (1996). Immune responses against multiple epitopes: A theory for immunodominance and antigenic variation. Semin Virol7: 83-92. (PDF)
Nowak MA, RM Anderson, MC Boerlijst, S Bonhoeffer, RM May, AJ McMichael (1996). HIV-1 evolution and disease progression. Science274: 1008-1011. (PDF)
Nowak MA, CRM Bangham (1996). Population dynamics of immune responses to persistent viruses. Science272: 74-79. (PDF)
Nowak MA, S Bonhoeffer, AM Hill, R Boehme, HC Thomas, H McDade (1996). Viral dynamics in hepatitis B virus infection. P Natl Acad Sci USA93: 4398-4402. (PDF)
Nowak MA, S Bonhoeffer, RM May (1996). Reply to Robustness of cooperation, A Mukherji, V Rajan, J Slagle. Nature379: 126. (PDF)
Payne RJH, MA Nowak, B Blumberg (1996). The dynamics of hepatitis B virus infection. P Natl Acad Sci USA93: 6542-6546. (PDF)
Stekel DJ, MA Nowak, TRE Southwood (1996). Prediction of future BSE spread. Nature381: 119. (PDF)
Tilman D, C Lehman, R May, M Nowak (1996). Reply to Species fragmentation or area loss? S Budiansky. Nature382: 216. (PDF)
Bittner B, S Bonhoeffer, MA Nowak (1997). Virus load and antigenic diversity. B Math Biol59: 881-896. (PDF)
Boerlijst MC, MA Nowak, K Sigmund (1997). Equal pay for all prisoners. Am Math Mon104: 303-305. (PDF)
Boerlijst MC, MA Nowak, K Sigmund (1997). The logic of contrition. J theor Biol185: 281-293. (PDF)
Bonhoeffer S, J Coffin, MA Nowak (1997). Human immunodeficiency virus drug therapy and virus load. J Virol71: 3275-3278. (PDF)
Bonhoeffer S, RM May, GM Shaw, MA Nowak (1997). Virus dynamics and drug therapy. P Natl Acad Sci USA94: 6971-6976. (PDF)
Bonhoeffer S, MA Nowak (1997). Pre-existence and emergence of drug resistance in HIV-1 infection. Proc R Soc B264: 631-637. (PDF)
Chun T-W, Stuyver L, Mizell S B, Ehler L A, Mican J A M, Baseler M, Lloyd A L, Nowak M A, Fauci A S (1997). Presence of an inducible HIV-1 latent reservoir during highly active antiretroviral therapy. P Natl Acad Sci USA94: 13193-13197. (PDF)
Cooke J, MA Nowak, MC Boerlijst, J Maynard Smith (1997). Evolutionary origins and maintenance of redundant gene expression during metazoan development. Trends Genet13: 360-364. (PDF)
Goulder PJR, RE Phillips, RA Colbert, S McAdam, G Ogg, MA Nowak, P Giangrande, G Luzzi, B Morgan, A Edwards, AJ McMichael, S Rowland-Jones (1997). Late escape from an immunodominant cytotoxic T-lymphocyte response associated with progression to AIDS. Nat Med3: 212-217. (PDF)
Goulder P, D Price, M Nowak, S Rowland-Jones, R Phillips, and A McMichael (1997). Co-evolution of human immunodeficiency virus and cytotoxic T-lymphocyte responses. Immunol Rev159: 17-29.
Lifson JD, MA Nowak, S Goldstein, JL Rossio, A Kinter, G Vasquez, TA Wiltrout, C Brown, D Schneider, L Wahl, AL Lloyd, J Williams, WR Elkins, AS Fauci, VM Hirsch (1997). The extent of early viral replication is a critical determinant of the natural history of simian immunodeficiency virus infection. J Virol71: 9508-9514. (PDF)
May RM, DJ Stekel, MA Nowak (1997). Antigenic diversity thresholds and hazard functions. Math Biosci139: 59-68. (PDF)
Nowak MA, MC Boerlijst, J Cooke, J Maynard Smith (1997). Evolution of genetic redundancy. Nature388: 167-171.(PDF)
Nowak MA, S Bonhoeffer, GM Shaw, RM May (1997). Anti-viral drug treatment: Dynamics of resistance in free virus and infected cell populations. J theor Biol184: 203-217. (PDF)
Nowak MA, AL Lloyd, G Vasquez, TA Wiltrout, LM Wahl, N Bischofsberger, J Williams, A Kinter, AS Fauci, VM Hirsch, JD Lifson (1997). Viral dynamics of primary viremia and antiretroviral therapy in simian immunodeficiency virus infection. J Virol71: 7518-7525. (PDF)
Sigmund K, MA Nowak (1997). The natural history of mutual aid: An eye for an eye, and a meal for a meal. In Wissenschaft als Kultur, ed. F Stadler. New York: Springer Verlag, 259-272.
Stekel D, C Parker, MA Nowak (1997). A model of lymphocyte recirculation. Immunol Today18: 216-221. (PDF)
Wein LM, SA Zenios, MA Nowak (1997). Dynamic multidrug therapies for HIV: A control theoretic approach. J theor Biol185: 15-29. (PDF)
Goh WC, ME Rogel, CM Kinsey, SF Michael, PN Fultz, MA Nowak, BH Hahn, M Emerman (1998). HIV-1 Vpr increases viral expression by manipulation of the cell cycle: A mechanism for selection of Vpr in vivo. Nat Med4: 65-71. (PDF)
Kilby JM, S Hopkins, T Venetta, B DiMassimo, GA Cloud, JY Lee, L Alldredge, E Hunter, D Lambert, D Bolognesi, T Matthews, L Carder, MR Johnson, MA Nowak, GM Shaw, MS Saag (1998). Potent suppression of HIV-1 replication in humans by T-20, a peptide inhibitor of gp-41 mediated virus entry. Nat Med4: 1302-1307. (PDF)
Levin BR, R Antia, E Berliner, P Bloland, S Bonhoeffer, M Cohen, T DeRouin, PI Fields, H Jafari, D Jernigan, M Lipsitch, JE McGowan, P Mead, M Nowak, T Porco, P Sykora, L Simmonsen, J Spitznagel, R Tauxe, F Tenover (1998). Resistance to antimicrobial chemotherapy: A prescription for research and action. Am J Med Sci315: 87-94. (PDF)
Nowak MA, DC Krakauer, A Klug, RM May (1998). Prion infection dynamics. Integr Biol1: 3-15. (PDF)
Nowak MA, K Sigmund (1998). Darwins dynamik. DMV-Mitteilungen4: 37-44. (PDF)
Nowak MA, K Sigmund (1998). Evolution of indirect reciprocity by image scoring. Nature393: 573-577. (PDF)
Nowak MA, K Sigmund (1998). The dynamics of indirect reciprocity. J theor Biol194: 561-574. (PDF)
Nowak MA, K Sigmund (1998). What two legs can learn from four legs. Book review of Foundations of Social Evolution, SA Frank; Cooperation Among Animals, AL Dugatkin. Nature395: 760-761. (PDF)
Ogg GS, X Jin, S Bonhoeffer, PR Dunbar, MA Nowak, S Monard, J Segal, Y Cao, SL Rowland-Jones, V Cerundolo, A Hurley, M Markowitz, DD Ho, DF Nixon, AJ McMichael (1998). Quantitation of HIV-1 specific cytotoxic T lymphocytes and plasma load of viral RNA. Science279: 2103-2106. (PDF)
Ostrowski MA, DC Krakauer, Y Li, SJ Justement, G Learn, LA Ehler, SK Stanley, MA Nowak, AS Fauci (1998). Effect of immune activation on the dynamics of human immunodeficiency virus replication and on the distribution of viral quasispecies. J Virol72: 7772-7784. (PDF)
Regoes RR, D Wodarz, MA Nowak (1998). Virus dynamics: The effect of target cell limitation and immune responses on virus evolution. J theor Biol191: 451-462. (PDF)
Ribeiro RM, S Bonhoeffer, MA Nowak (1998). The frequency of resistant mutant virus before antiviral therapy. AIDS12: 461-465. (PDF)
Sigmund K, M Boerlijst, MA Nowak (1998). Automata and inner states for repeated games. In Game Theory, Experience, Rationality, eds. W Leinfeller, E Koehler. London: Kluwer Academic Publishers, 131-139.
Sigmund K, MA Nowak (1998). Cyber-sociology. Book review of The Complexity of Cooperation: Agent-Based Models of Competition and Collaboration, R Axelrod. Nature392: 457. (PDF)
Wodarz D, P Klenerman, MA Nowak (1998). Dynamics of cytotoxic T-lymphocyte exhaustion. Proc R Soc B265: 191-203. (PDF)
Wodarz D, MA Nowak (1998). Mathematical models of virus dynamics and resistance. J HIV Ther3: 36-41. (PDF)
Wodarz D, MA Nowak (1998). The effect of different immune responses on the evolution of virulent CXCR4-tropic HIV. Proc R Soc B265: 2149-2158. (PDF)
Arnaout RA, AL Lloyd, TR O'Brien, JJ Goedert, JM Leonard, MA Nowak (1999). A simple relationship between viral load and survival time in HIV-1 infection. P Natl Acad Sci USA96: 11549-11553. (PDF)
Bangham CRM, SE Hall, KJM Jeffery, AM Vine, A Witkover, MA Nowak, D Wodarz, K Ususku, M Osame (1999). Genetic control and dynamics of the cellular immune response to the human T-cell leukaemia virus, HTLV-I. Phil Trans R Soc B354: 691-700. (PDF)
Callaway DS, RM Ribeiro, MA Nowak (1999). Virus phenotype switching and disease progression in HIV-1 infection. Proc R Soc B266: 2523-2530. (PDF)
Hockett RD, JM Kilby, CA Derdeyn, MS Saag, M Sillers, K Squires, S Chiz, MA Nowak, GM Shaw, RP Bucy (1999). Constant mean viral copy number per infected cell in tissues regardless of high, low, or undetectable plasma HIV RNA. J Exp Med189: 1545-1554. (PDF)
Jefferey KJM, K Usuku, SE Hall, W Matsumoto, GP Taylor, J Proctor, M Bunce, GS Ogg, KI Welsh, JN Weber, AL Lloyd, MA Nowak, M Nagai, D Kodama, S Izumo, M Osame, CRM Bangham (1999). HLA alleles determine human T-lymphotropic virus-I (HTLV-I) proviral load and the risk of HTLV-1-associated myelopathy. P Natl Acad Sci USA96: 3848-3853. (PDF)
Krakauer DC, MA Nowak (1999). Evolutionary preservation of redundant duplicated genes. Semin Cell Dev Biol10: 555-559. (PDF)
Krakauer DC, MA Nowak (1999). T-cell induced pathogenesis in HIV: Bystander effects and latent infection. Proc R Soc B266: 1069-1075. (PDF)
Masel J, VAA Jansen, MA Nowak (1999). Quantifying the kinetic parameters of prion replication. Biophys Chem77: 139-152. (PDF)
Nowak MA (1999). The mathematical biology of human infections. Conserv Ecol3: 12. (online version)
Nowak MA, DC Krakauer (1999). The evolution of language. P Natl Acad Sci USA96: 8028-8033. (PDF)
Nowak MA, DC Krakauer, A Dress (1999). An error limit for the evolution of language. Proc R Soc B266: 2131-2136. (PDF)
Nowak MA, J Plotkin, D Krakauer (1999). The evolutionary language game. J theor Biol200: 147-162. (PDF)
Nowak MA, K Sigmund (1999). Aux racines de la coopération. Recherche325: 38-39. (PDF)
Nowak MA, K Sigmund (1999). Phage-lift for game theory. Nature398: 367-368. (PDF)
Ogg GS, X Jin, S Bonhoeffer, P Moss, MA Nowak, S Monard, JP Segal, Y Cao, SL Rowland-Jones, A Hurley, M Markowitz, DD Ho, AJ McMichael, DF Nixon (1999). Decay kinetics of Human Immunodeficiency Virus-specific effector cytotoxic T lymphocytes after combination antiretroviral therapy. J Virol73: 797-800. (PDF)
Sigmund K, MA Nowak (1999). Evolutionary game theory. Curr Biol9: R503-R505. (PDF)
Taylor GP, SE Hall, S Navarette, CA Michie, R Davis, AD Witkover, M Rossor, MA Nowak, P Rudge, E Matutes, CRM Bangham, JN Weber (1999). Effect of lamivudine on human T-cell leukemia virus type 1 (HTLV-1) DNA copy number, T-cell phenotype, and anti-Tax cytotoxic T-cell frequency in patients with HTLV-1-associated myelopathy. J Virol73: 10289-10295. (PDF)
Wahl LM, MA Nowak (1999). The continuous prisoner's dilemma: I. Linear reactive strategies. J theor Biol200: 307-321. (PDF)
Wahl LM, MA Nowak (1999). The continuous prisoner's dilemma: II. Linear reactive strategies with noise. J theor Biol200: 323-338. (PDF)
Wodarz D, AL Lloyd, VAA Jansen, MA Nowak (1999). Dynamics of macrophage and T cell infection by HIV. J theor Biol 196: 101-113. (PDF)
Wodarz D, MA Nowak (1999). Dynamics of HIV pathogenesis and treatment. In Origin and Evolution of Viruses, eds. E Domingo, R Webster, J Holland. London: Academic Press, 197-223.
Wodarz D, MA Nowak (1999). Dynamics of immune escape in HIV infection. Wien Klin Wochenschr111: 419-427. (PDF)
Wodarz D, MA Nowak (1999). Evolutionary dynamics of HIV-1 induced subversion of the immune response. Immunol Rev168: 75-89. (PDF)
Wodarz D, MA Nowak (1999). Specific therapy regimes could lead to long-term immunological control of HIV. P Natl Acad Sci USA96: 14464-14469. (PDF)
Wodarz D, MA Nowak, CRM Bangham (1999). The dynamics of HTLV-I and the CTL response. Immunol Today20: 220-227. (PDF)
Arnaout R, MA Nowak (2000). Competitive coexistence in antiviral immunity. J theor Biol204: 431-441. (PDF)
Arnaout R, MA Nowak, D Wodarz (2000). HIV-1 dynamics revisited: Biphasic decay by cytotoxic T lymphocyte killing? Proc R Soc B267: 1347-1354. (PDF)
Barchet W, S Oehen, P Klenerman, D Wodarz, GA Bocharov, AL Lloyd, MA Nowak, H Hengartner, RM Zinkernagel, S Ehl (2000). Direct quantitation of rapid elimination of viral antigen-positive lymphocytes by antiviral CD8+ T cells in vivo. Eur J Immunol30: 1356-1363. (PDF)
Krakauer DC, MA Nowak (2000). Book review of Fragile Dominion: Complexity and the Commons, S Levin. Not Am Math Soc47: 564-568. (PDF)
Lifson JD, JL Rossio, R Arnaout, L Li, TL Parks, DM Schneider, RF Kiser, VJ Coalter, G Walsh,RJ Imming, B Fisher, BM Flynn, N Bischofsberger, M Piatak, VM Hirsch, MA Nowak, D Wodarz D (2000). Containment of simian immunodeficiency virus infection: Cellular immune responses and protection from rechallenge following transient post-inoculation antiretroviral treatment. J Virol74: 2584-2593. (PDF)
Nowak MA (2000). Evolutionary biology of language. Phil Trans R Soc B355: 1615-1622. (PDF)
Nowak MA (2000). Homo grammaticus. Nat Hist109: 36-44. (PDF)
Nowak MA (2000). The basic reproductive ratio of a word, the maximum size of a lexicon. J theor Biol204: 179-189. (PDF)
Nowak MA, KM Page, K Sigmund (2000). Fairness versus reason in the ultimatum game. Science289: 1773-1775. (PDF)
Nowak MA, JB Plotkin, VAA Jansen (2000). The evolution of syntactic communication. Nature404: 495-498. (PDF)
Nowak MA, K Sigmund (2000). Cooperation versus competition. Financ Anal J56: 13-22. (PDF)
Nowak MA, K Sigmund (2000). Games on grids. In The Geometry of Ecological Interactions, eds. U Dieckmann, R Law, JAJ Metz. Cambridge University Press, 135-150. (PDF)
Nowak MA, K Sigmund (2000). Shrewd investments. Science288: 819-820.(PDF)
Page KM, MA Nowak (2000). A generalized adaptive dynamics framework can explain the evolutionary ultimatum game. J theor Biol209: 173-179. (PDF)
Page KM, MA Nowak, K Sigmund (2000). The spatial ultimatum game. Proc R Soc B267: 2177-2182. (PDF)
Plotkin JB, MA Nowak (2000). Language evolution and information theory. J theor Biol205: 147-159. (PDF)
Plotkin JB, MD Potts, DW Yu, S Bunyavejchewin, R Condit, R Foster, S Hubbell, J LaFrankie, N Manokaran, L Hua Seng, R Sukumar, MA Nowak, PS Ashton (2000). Predicting species diversity in tropical forests. P Natl Acad Sci USA97: 10850-10854. (PDF)
Regoes RR, MA Nowak, S Bonhoeffer (2000). Evolution of virulence in a heterogeneous host population. Evolution54: 64-71. (PDF)
Sigmund K, MA Nowak (2000). A tale of two selves. Science290: 949-950. (PDF)
Sigmund K, MA Nowak (2000). Playing for keeps. Book review of Game Theory Evolving: A Problem-Centered Introduction to Modeling Strategic Interaction, H Gintis. Science290: 281. (PDF)
Trapa PE, MA Nowak (2000). Nash equilibria for an evolutionary language game. J Math Biol41: 172-188. (PDF)
Wahl LM, B Bitter, MA Nowak (2000). Immunological transitions in response to antigenic mutation during viral infection. Int Immunol12: 1371-1380. (PDF)
Wahl LM, MA Nowak (2000). Adherence and drug resistance: Predictions for therapy outcome. Proc R Soc B267: 835-843. (PDF)
Wodarz D, R Arnaout, MA Nowak, Lifson JD (2000). Transient antiretroviral treatment during acute simian immundeficiency virus infection facilitates long-term control of the virus. Phil Trans R Soc B355: 1021-1029. (PDF)
Wodarz D, RM May, MA Nowak (2000). The role of antigen-independent persistence of memory cytotoxic T lymphocytes. Int Immunol12: 467-477. (PDF)
Wodarz D, MA Nowak (2000). CD8 memory, immunodominance and antigenic escape. Eur J Immunol30: 2704-2712. (PDF)
Wodarz D, MA Nowak (2000). Correlates of cytotoxic T-lymphocyte-mediated virus control: Implications for immuno-suppressive infections and their treatment. Phil Trans R Soc B355: 1059-1070. (PDF)
Wodarz D, MA Nowak (2000). HIV therapy: Managing resistance. P Natl Acad Sci USA97: 8193-8195. (PDF)
Wodarz D, MA Nowak (2000). Immune responses and viral phenotype: Do replication rate and cytopathogenicity influence virus load? J Theor Med2: 113-127. (PDF)
Wodarz D, KM Page, RA Arnaout, AR Thomson, JD Lifson, MA Nowak (2000). A new theory of cytotoxic T-lymphocyte memory: Implications for HIV treatment. Phil Trans R Soc B355: 329-343.(PDF)
Komarova NL, P Niyogi, MA Nowak (2001). The evolutionary dynamics of grammar acquisition. J theor Biol209: 43-59. (PDF)
Komarova NL, MA Nowak (2001). Natural selection of the critical period for language acquisition. Proc R Soc B268: 1189-1196. (PDF)
Komarova NL, MA Nowak (2001). Evolutionary dynamics of the lexical matrix. B Math Biol63: 451-484. (PDF)
Krakauer DC, MA Nowak (2001). Genetic redundancy. In Encyclopedia of Genetics, eds. S Brenner, J Miller. London: Academic Press, 845-846.
Lifson JD, JL Rossio, M Piatak, T Parks, L Li, R Kiser, V Coalter, B Fisher, BM Flynn, VM Hirsch, RE Means, S Czajak, KA Reimann, JE Schmitz, J Ghrayeb, N Bischofsberger, MA Nowak, RC Desrosiers, D Wodarz (2001). Role of CD8+ lymphocytes in control of simian immunodeficiency virus infection and resistance to rechallenge after transient early antiretroviral treatment. J Virol75: 10187-10199. (PDF)
Nowak MA, NL Komarova (2001). Towards an evolutionary theory of language. Trends Cogn Sci5: 288-295. (PDF)
Nowak MA, NL Komarova, P Niyogi (2001). Evolution of universal grammar. Science291: 114-118. (PDF)
Plotkin JB, MA Nowak (2001). Major transitions in language evolution. Entropy3: 227-246. (PDF)
Sigmund K, C Hauert, MA Nowak (2001). Reward and punishment. P Natl Acad Sci USA98: 10757-10762. (PDF)
Sigmund K, MA Nowak (2001). Tides of tolerence. Nature414: 403-405. (PDF)
Wodarz D, SE Hall, K Usuku, M Osame, GS Ogg, AJ McMichael, MA Nowak, CRM Bangham (2001). Cytotoxic T-cell abundance and virus load in human immunodeficiency virus type 1 and human T-cell leukaemia virus type 1. Proc R Soc B268: 1215-1221. (PDF)
Belz GT, D Wodarz, G Diaz, MA Nowak, PC Doherty (2002). Compromised influenza virus-specific CD8+-T-cell memory in CD4+-T-cell-deficient mice. J Virol76: 12388-12393. (PDF)
Komarova NL, C Lengauer, B Vogelstein, MA Nowak (2002). Dynamics of genetic instability in sporadic and familial colorectal cancer. Cancer Biol Ther 1: 685-692. (PDF)
Komarova NL, MA Nowak (2002). Population dynamics of grammar acquisition. In Simulating the Evolution of Language, eds. A Cangelosi, D Parisi. London: Springer Verlag, 149-163.
Michor F, MA Nowak (2002). Evolution: The good, the bad and the lonely. Nature419: 677-679. (PDF)
Michor F, MA Nowak (2002). Immunology tomorrow. Book review of Immunology and Evolution of Infectious Disease, SA Frank. Nature420: 741-742. (PDF)
Nowak MA (2002). From quasispecies to universal grammar. Z Phys Chem16: 5-20. (PDF)
Nowak MA, NL Komarova, P Niyogi (2002). Computational and evolutionary aspects of language. Nature417: 611-617. (PDF)
Nowak MA, NL Komarova, A Sengupta, PF Jallepalli, IM Shih, B Vogelstein, C Lengauer (2002). The role of chromosomal instability in tumor initiation. P Natl Acad Sci USA99: 16226-16231. (PDF)
Nowak MA, K Sigmund (2002). Bacterial game dynamics. Nature418: 138-139. (PDF)
Nowak MA, K Sigmund (2002). Super- and coinfection:
The two extremes. In Adaptive Dynamics of Infectious Diseases: In Pursuit of Virulence Management, eds. U Dieckmann, JAJ Metz, M Sabelis, K Sigmund. Cambridge: Cambridge University Press, 124-138. (PDF)
Page KM, MA Nowak (2002). Empathy leads to fairness. B Math Biol64: 1101-1116. (PDF)
Page KM, MA Nowak (2002). Unifying evolutionary dynamics. J theor Biol219: 93-98. (PDF)
Plotkin JB, MA Nowak (2002). The different effects of apoptosis and DNA repair on tumorigenesis. J theor Biol214: 453-467. (PDF)
Sigmund K, E Fehr, MA Nowak (2002). The economics of fair play. Sci Am286: 82-87. (PDF)
Wodarz D, MA Nowak (2002). Mathematical models of HIV pathogenesis and treatment. Bioessays24: 1178-1187. (PDF)
Frank SA, Y Iwasa, MA Nowak (2003). Patterns of cell division and the risk of cancer. Genetics163: 1527-1532. (PDF)
Frank SA, MA Nowak (2003). Developmental predisposition to cancer. Nature422: 494. (PDF)
Iwasa Y, F Michor, Nowak MA (2003). Evolutionary dynamics of escape from biomedical intervention. Proc R Soc B270: 2573-2578. (PDF)
Komarova NL, MA Nowak (2003). Language dynamics in finite populations. J theor Biol221: 445-457. (PDF)
Komarova NL, MA Nowak (2003). Language, learning and evolution. In Language Evolution, eds. MH Christiansen, S Kirby. Oxford: Oxford University Press, 317-337.
Komarova NL, A Sengupta, MA Nowak (2003) Mutation-selection networks of cancer initiation: Tumor suppressor genes and chromosomal instability. J theor Biol223: 433-450. (PDF)
Michor F, SA Frank, RM May, Y Iwasa, MA Nowak (2003). Somatic selection for and against cancer. J theor Biol225: 377-382. (PDF)
Michor F, Y Iwasa, NL Komarova, MA Nowak (2003). Local regulation of homeostasis favors chromosomal instability. Curr Biol13: 581-584. (PDF)
Michor F, MA Nowak, SA Frank, Y Iwasa (2003). Stochastic elimination of cancer cells. Proc R Soc B270: 2017-2024. (PDF)
Mitchener G, MA Nowak (2003). Competitive exclusion and coexistence of universal grammars. B Math Biol65: 67-93. (PDF)
Nowak MA, F Michor, Y Iwasa (2003). The linear process of somatic evolution. P Natl Acad Sci USA100: 14966-14969. (PDF)
Rajagopalan H, MA Nowak, B Vogelstein, C Lengauer (2003). The significance of unstable chromosomes in colorectal cancer. Nat Rev Cancer3: 695-701. (PDF)
Sasaki A, MA Nowak (2003). Mutation landscapes. J theor Biol224: 241-247. (PDF)
Wei X, JM Decker, S Wang, H Hui, JC Kappes, W Xiaoyun, JF Salazar, MG Salazar, JM Kilby, MS Saag, NL Komarova, MA Nowak, BH Hahn, PD Kwong, GM Shaw (2003). Antibody neutralization and escape by HIV-1. Nature422: 307-312. (PDF)
Frank SA, MA Nowak(2004). Problems of somatic mutation and cancer. Bioessays26: 291-299. (PDF)
Iwasa Y, F Michor, MA Nowak (2004). Evolutionary dynamics of invasion and escape. J theor Biol226: 205-214. (PDF)
Iwasa Y, F Michor, MA Nowak (2004). Some basic properties of immune selection. J theor Biol229: 179-188. (PDF).
Iwasa Y, F Michor, MA Nowak (2004). Stochastic tunnels in evolutionary dynamics. Genetics166: 1571-1579. (PDF)
Jones NA, X Wei, DR Flower, ML Wong, F Michor, MS Saag, BH Hahn, MA Nowak, GM Shaw (2004). Determinants of human immunodeficiency virus type 1 escape from the primary CD8+ cytotoxic Y lymphocyte response. J Exp Med200: 1243-1256. (PDF)
Matsen E, MA Nowak (2004). Win-stay, lose-shift in language learning from peers. P Natl Acad Sci USA101: 18053-18057. (PDF)
Michor F, Y Iwasa, MA Nowak (2004). Dynamics of cancer progression. Nat Rev Cancer4: 197-205. (PDF)
Michor F, Y Iwasa, H Rajagopalan, C Lengauer, MA Nowak (2004). Linear model of colon cancer initiation. Cell Cycle3: 358-362. (PDF)
Mitchener WG, MA Nowak (2004). Chaos and language. Proc R Soc B271: 701-704. (PDF)
Nowak MA (2004). Prisoners of the dilemma. Nature427: 491. (PDF)
Nowak MA (2004). Theory is available light. Curr Biol14: R406-R407. (PDF)
Nowak MA, F Michor, Y Iwasa (2004). Evolutionary dynamics of tumor suppressor gene inactivation. P Natl Acad Sci USA101: 10635-10638. (PDF).
Nowak MA, A Sasaki, C Taylor, D Fudenberg (2004). Emergence of cooperation and evolutionary stability in finite populations. Nature428: 646-650. (PDF)
Nowak MA, K Sigmund (2004). Evolutionary dynamics of biological games. Science303: 793-799. (PDF)
Nowak MA, K Sigmund (2004). Population dynamics in evolutionary ecology. In Life Sciences for the 21st Century, eds. E Keinan, I Schechter, M Sela. Weinham: Wiley-VCH Verlag GmbH & Co.
Taylor C, D Fudenberg, A Sasaki, MA Nowak (2004). Evolutionary game dynamics in finite populations. B Math Biol66: 1621-1644. (PDF)
Imhof LA, D Fudenberg, MA Nowak (2005). Evolutionary cycles of cooperation and defection. P Natl Acad Sci USA102: 10797-10800. (PDF)
Iwasa Y, F Michor, NL Komarova, MA Nowak (2005). Population genetics of tumor suppressor genes. J theor Biol233: 15-23. (PDF)
Iwasa Y, F Michor, MA Nowak (2005). Virus evolution within patients increases pathogenicity. J theor Biol232: 17-26. (PDF)
Lieberman E, C Hauert, MA Nowak (2005). Evolutionary dynamics on graphs. Nature433: 312-316. (PDF)
Michor F, TP Hughes, Y Iwasa, S Branford, NP Shah, CL Sawyers, MA Nowak (2005). Dynamics of chronic myeloid leukaemia. Nature435: 1267-1270. (PDF)
Michor F, Y Iwasa, C Lengauer, MA Nowak (2005). Dynamics of colorectal cancer. Semin Cancer Biol15: 484-493. (PDF)
Michor F, Y Iwasa, B Vogelstein, C Lengauer, MA Nowak (2005). Can chromosomal instability initiate tumorigenesis? Semin Cancer Biol15: 43-45. (PDF)
Nowak MA, NL Komarova (2005). The evolution of altruism: From game theory to human language. In Spiritual Information, ed. CL Harper Jr. Templeton Foundation Press, 308-314.
Nowak MA, K Sigmund (2005). Evolution of indirect reciprocity. Nature437: 1291-1298.(PDF)
Traulsen A, A Sengupta, MA Nowak (2005). Stochastic evolutionary dynamics on two levels. J theor Biol235: 393-401. (PDF)
Willensdorfer M, MA Nowak (2005). Mutation in evolutionary games can increase average fitness at equilibrium. J theor Biol237: 355-362. (PDF)
Fudenberg D, MA Nowak, C Taylor, LA Imhof (2006). Evolutionary game dynamics in finite populations with strong selection and weak mutation. Theor Popul Biol70: 352-363. (PDF)
Hauert C, F Michor, MA Nowak, M Doebeli (2006). Synergy and discounting of cooperation in social dilemmas. J theor Biol239: 195-202. (PDF)
Imhof LA, MA Nowak (2006). Evolutionary game dynamics in a Wright-Fisher process. J Math Biol52: 667-681. (PDF)
Iwasa Y, MA Nowak, F Michor (2006). Evolution of resistance during clonal expansion. Genetics172: 2557-2566. (PDF)
Michor F, Y Iwasa, MA Nowak (2006). The age incidence of chronic myeloid leukemia can be explained by a one-mutation model. P Natl Acad Sci USA103: 14931-14934. (PDF)
Michor F, MA Nowak, Y Iwasa (2006). Evolution of resistance to cancer therapy. Curr Pharm Design12: 261-271. (PDF)
Michor F, MA Nowak, Y Iwasa (2006). Stochastic dynamics of metastasis formation. J theor Biol240: 521-530. (PDF)
Nowak MA (2006). Five rules for the evolution of cooperation. Science314: 1560-1563. (PDF)
Nowak MA, F Michor, Y Iwasa (2006). Genetic instability and clonal expansion. J theor Biol241: 26-32. (PDF)
Ohtsuki H, C Hauert, E Lieberman, MA Nowak (2006). A simple rule for the evolution of cooperation on graphs and social networks. Nature441: 502-505. (PDF)(supplementary information)
Ohtsuki H, MA Nowak (2006). Evolutionary games on cycles. Proc R Soc B273: 2249-2256. (PDF)
Ohtsuki H, MA Nowak (2006). The replicator equation on graphs. J theor Biol243: 86-97. (PDF)
Pacheco JM, A Traulsen, MA Nowak (2006). Active linking in evolutionary games. J theor Biol243: 437-443. (PDF)
Pacheco JM, A Traulsen, MA Nowak (2006). Coevolution of strategy and structure in complex networks with dynamical linking. Phys Rev Lett97: 258103. (PDF)
Pfeiffer T, MA Nowak (2006). Climate change: All in the game. Nature441: 583-584. (PDF)
Pfeiffer T, MA Nowak (2006). Digital cows grazing on digital grounds. Curr Biol16: R946-R949. (PDF)
Taylor C, Y Iwasa, MA Nowak (2006). A symmetry of fixation times in evolutionary dynamics. J theor Biol243: 245-251. (PDF)
Taylor C, MA Nowak (2006). Evolutionary game dynamics with non-uniform interaction rates. Theor Popul Biol69: 243-252. (PDF)
Traulsen A, MA Nowak (2006). Evolution of cooperation by multilevel selection. P Natl Acad Sci USA103: 10952-10955. (PDF)
Traulsen A, MA Nowak, J Pacheco (2006). Stochastic dynamics of invasion and fixation. Phys Rev E74: 011909. (PDF)
Beerenwinkel N, T Antal, D Dingli, A Traulsen, KW Kinzler, VE Velculescu, B Vogelstein, MA Nowak (2007). Genetic progression and the waiting time to cancer. PLoS Comput Biol3: e225. (PDF)
Hauert C, A Traulsen, H Brandt, MA Nowak, K Sigmund (2007). Via freedom to coercion: The emergence of costly punishment. Science316: 1905-1907. (PDF)(supplementary information)
Imhof LA, D Fudenberg, MA Nowak (2007). Tit-for-tat or win-stay, lose-shift? J theor Biol247: 574-580. (PDF)
Iwasa Y, F Michor, MA Nowak (2007). Directional evolution of virus within a host under immune selection. In Mathematics for Life Science and Medicine, eds. Y Takeuchi, Y Iwasa, K Sato. Springer: New York.
Nowak MA, K Sigmund (2007). How populations cohere: Five rules for cooperation. In Theoretical Ecology: Principles and Applications, eds. RM May, A McLean. Oxford: Oxford University Press, 7-16. (PDF)
Ohtsuki H, P Bordalo, MA Nowak (2007). The one third law of evolutionary dynamics. J theor Biol249: 289-295. (PDF)
Ohtsuki H, MA Nowak (2007). Direct reciprocity on graphs. J theor Biol247: 462-470. (PDF)
Ohtsuki H, J Pacheco, MA Nowak (2007). Breaking the symmetry between interaction and replacement in evolutionary dynamics on graphs. Phys Rev Lett98: 108106. (PDF)
Ohtsuki H, J Pacheco, MA Nowak (2007). Evolutionary graph theory: Breaking the symmetry between interaction and replacement. J theor Biol246: 681-694. (PDF)
Taylor C, MA Nowak (2007). Transforming the dilemma. Evolution61: 2281-2292. (PDF)
Traulsen A, Y Iwasa, MA Nowak (2007). The fastest evolutionary trajectory. J theor Biol249: 617-623. (PDF)
Traulsen A, MA Nowak (2007). Chromodynamics of cooperation in finite populations.
PLoS ONE2: e270. (PDF)
Traulsen A, MA Nowak, J Pacheco (2007). Stochastic payoff evaluation increases the temperature of selection. J theor Biol244: 349-356. (PDF)
Traulsen A, JM Pacheco, MA Nowak (2007). Pairwise comparison and selection temperature in evolutionary game dynamics. J theor Biol246: 522-529. (PDF)
Willensdorfer M, R Bürger, MA Nowak (2007). Phenotypic mutation rates and the abundance of abnormal proteins in yeast. PLoS Comput Biol3: e203. (PDF)
Dingli D, MA Nowak (2008). Evolutionary dynamics of cancer. Book review of Dynamics of Cancer: Incidence, Inheritance, and Evolution, SA Frank. Trends Ecol Evol23: 254-255. (PDF)
Dreber A, MA Nowak (2008). Gambling for global goods. P Natl Acad Sci USA105: 2261-2262. (PDF)
Jones S, W Chen, G Parmigiani, F Diehl, N Beerenwinkel, T Antal, A Traulsen, MA Nowak, C Siegel, VE Velculescu, KW Kinzler, B Vogelstein, J Willis, SD Markowitz (2008). Comparative lesion sequencing provides insights into tumor evolution. P Natl Acad Sci USA105: 4283-4288. (PDF)
Langer P, MA Nowak, C Hauert (2008). Spatial invasion of cooperation. J theor Biol250: 634-641. (PDF)
Ohtsuki H, MA Nowak (2008). Evolutionary stability on graphs. J theor Biol251: 698-707. (PDF)
Pacheco J, A Traulsen, H Ohtsuki, MA Nowak (2008). Repeated games and direct reciprocity under active linking. J theor Biol250: 723-731. (PDF)
Pinker S, MA Nowak, JJ Lee (2008). The logic of indirect speech. P Natl Acad Sci USA105: 833-838. (PDF)
Traulsen A, N Shoresh, MA Nowak (2008). Analytical results for individual and group selection of any intensity. B Math Biol70: 1410-1424. (PDF)